These adorable spaghetti bolognese muffins are a game-changer, trust me! Imagine all the comforting flavors of your favorite pasta dish transformed into perfectly portioned, handheld bites with a gooey cheese center. They’re crispy on the outside, tender on the inside, and absolutely irresistible for both kids and adults alike. This Bolognese Spaghetti Bake Muffin Cups recipe takes traditional pasta night to a whole new level of fun!

Why You’ll Love This Spaghetti Bolognese Muffin Cups
- Perfectly Portable: These little pasta bundles are ideal for lunchboxes, picnics, or eating on the go without the mess of traditional spaghetti.
- Hidden Surprise: Each muffin hides a melty bocconcini center that creates the most satisfying cheese pull when you take a bite.
- Meal Prep Magic: Make a batch on Sunday and enjoy delicious, ready-to-eat meals throughout the week.
- Kid-Friendly: Even picky eaters can’t resist these fun, handheld pasta muffins!
Ingredients
- Spaghetti: The star of the show, creating that classic pasta base we all love.
- Bolognese Sauce: Brings rich, meaty flavor to every bite; use homemade or your favorite jarred sauce.
- Eggs: Acts as the binding agent that holds everything together.
- Plain Flour: Helps create structure so your muffins hold their shape.
- Cheddar Cheese: Adds a sharp, tangy flavor and that irresistible melty texture.
- Parmesan Cheese: Brings a nutty, salty kick that elevates the entire dish.
- Cherry Bocconcini: Creates that magical, gooey center that’ll make everyone swoon.
- Baking Paper: Optional but recommended for easy removal and cleanup.
Note: The exact measurements for these ingredients will be listed in the recipe card below the article.
How to Make the Spaghetti Bolognese Muffin Cups
Step 1: Prepare Your Muffin Tin
Preheat your oven to 180°C. Get creative with your muffin tin prep, either scrunch up squares of baking paper to line each hole (my personal favorite method for easy removal) or lightly grease the tin if you’re short on time.
Step 2: Cook the Pasta
Break your spaghetti into thirds (this makes it so much easier to mix and eat later) and cook until just tender, about 8 minutes. You want it al dente since it’ll continue cooking in the oven.
Step 3: Mix It Up
Drain that pasta and return it to the warm pan. Now for the fun part, stir in your bolognese sauce until every strand is coated in that rich, tomatoey goodness. Add the beaten eggs, flour, and half the cheddar, then give it a gentle mix. Season it well, these little bites love a good hit of salt and pepper!
Step 4: Cheese Mixture
In a separate bowl, mix your remaining cheddar with the parmesan. This cheesy topping is going to create the most gorgeous golden crust, so don’t skimp!
Step 5: Assemble the Muffins
Spoon about 1/4 cup of your pasta mixture into each muffin hole. Here comes the magic, press a bocconcini into the center of each one, gently nudging it down so it’s surrounded by pasta. Top each muffin with a generous sprinkle of your cheese mixture.
Step 6: Bake to Perfection
Pop them in the oven for 20-25 minutes until they’re golden on top and the cheese has melted into bubbly perfection. Your kitchen is going to smell absolutely divine!
Pro Tips for Making the Spaghetti Bolognese Muffin Cups
- Al Dente Pasta: Cook your spaghetti just until tender, overcooked pasta will make soggy muffins.
- Cool Before Removing: Let these beauties cool in the tin for about 5-10 minutes before attempting to remove them, they’ll firm up and hold their shape better.
- Sauce Consistency: If your bolognese sauce is very watery, simmer it for a few minutes to reduce excess liquid before mixing with pasta.
- Cheese Variations: No bocconcini? Try small cubes of mozzarella or even a teaspoon of ricotta in the center instead.
How to Serve
These versatile little pasta muffins shine in so many ways:
- Serve warm with a simple green salad for a complete meal.
- Pack in lunchboxes with some cherry tomatoes and cucumber sticks.
- Add a dollop of pesto or a drizzle of extra virgin olive oil on top for an extra flavor boost.
- Pair with garlic bread for the ultimate Italian-inspired feast.
The Bolognese Spaghetti Bake Muffin Cups are perfect for potlucks too, they’re much easier to serve than traditional pasta dishes and stay deliciously warm for quite a while!
Make Ahead and Storage
Storing Leftovers
Once cooled, store these little gems in an airtight container in the fridge for up to 3 days. They actually taste even better the next day when all the flavors have had time to mingle!
Freezing
These muffins freeze beautifully! Place them in a single layer on a baking sheet until frozen solid, then transfer to a freezer bag. They’ll keep for up to 2 months.
Reheating
For that fresh-baked taste, reheat in a 160°C oven for about 10-15 minutes until warmed through. In a rush? 30-45 seconds in the microwave will do the trick, though you’ll lose some of that lovely crispness.
FAQs
Can I use different pasta shapes for this recipe?
Absolutely! While spaghetti gives that classic look, shorter pasta shapes like penne or fusilli work wonderfully too. Just make sure to adjust cooking times accordingly and choose shapes that will hold together well.
How do I know when the muffins are done baking?
Look for that gorgeous golden-brown cheese topping and a slight firmness when you gently press the top. If you insert a knife near the edge (not through the cheese center), it should come out clean.
Can I make these vegetarian?
You bet! Swap the meat bolognese for a vegetarian version or even a simple marinara sauce. Add some sautéed mushrooms or vegetables to bulk them up and add extra flavor.
My kids don’t like bocconcini. Can I leave it out?
While the gooey center is part of the magic, you can absolutely make these without it. Try substituting with their favorite cheese instead, or simply omit it altogether, they’ll still be delicious little pasta bundles!
These Bolognese Spaghetti Bake Muffin Cups are about to become your new favorite way to enjoy pasta! They’ve been a total hit in my kitchen, and I just know they’ll be in yours too. If you’re looking for more creative, family-friendly recipes that transform classics into exciting new dishes, be sure to Keep This Recipe in your collection. I’d love to hear how these turned out for you, happy cooking, friends!

Spaghetti Bolognese Muffin Cups
Equipment
- Muffin Tin
Ingredients
Main Ingredients
- 150 g spaghetti
- 425 g bolognese sauce
- 2 eggs lightly beaten
- 50 g plain flour
- 120 g cheddar cheese grated
- 20 g parmesan cheese grated
- 12 cherry bocconcini
Instructions
- Preheat oven to 180°C. Line a 12-hole muffin tin with baking paper squares or grease lightly.
- Break spaghetti into thirds and cook in boiling water for 8 minutes. Drain and return to pan.
- Add bolognese sauce and stir well to combine.
- Add beaten eggs, flour, and half the cheddar. Mix gently and season well.
- Mix remaining cheddar with grated parmesan in a small bowl.
- Place 1/4 cup of mixture into each muffin hole. Add a bocconcini in the center and press down gently.
- Sprinkle a generous teaspoon of the mixed cheeses on each muffin.
- Bake for 20–25 minutes until golden and cheese is melted. Cool in the tin before serving.